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Organic Chemistry 6th Edition Chapter 2 Paula Yurkanis Bruice An Introduction to Organic Compounds Nomenclature, Physical Properties, and Representation of Structure 1 © 2011 Pearson Education, Inc. Alkanes are hydrocarbons containing only single bonds General formula: CnH2n+2 2 © 2011 Pearson Education, Inc. 3 © 2011 Pearson Education, Inc. Constitutional isomers have the same molecular formula, but their atoms are linked differently 4 © 2011 Pearson Education, Inc. Nomenclature of Alkyl Substituents Removing a hydrogen from an alkane results in an alkyl substituent 5 © 2011 Pearson Education, Inc. If a hydrogen is replaced by an OH, the compound becomes an alcohol; if it is replaced by an NH2, the compound becomes an amine; 6 © 2011 Pearson Education, Inc. if it is replaced by a halogen, the compound becomes an alkyl halide; and if it is replaced by an OR, the compound becomes an ether Some common names are derived from the alkyl groups 7 © 2011 Pearson Education, Inc. Different Kinds of Carbons and Hydrogens 8 © 2011 Pearson Education, Inc. A compound can have more than one name, but a name must specify only one compound The prefix “tert” is used for tert-butyl and tert-pentyl compounds 9 © 2011 Pearson Education, Inc. The use of an “iso” prefix: 10 © 2011 Pearson Education, Inc. 11 © 2011 Pearson Education, Inc. Nomenclature of Alkanes 1. Determine the number of carbons in the longest continuous chain 12 © 2011 Pearson Education, Inc. 2. Number the chain so that the substituent gets the lowest number 13 © 2011 Pearson Education, Inc. Numbers are used only for systematic names but not common names 14 © 2011 Pearson Education, Inc. 3. Number the substituents to yield the lowest possible number in the number of the compound substituents are listed in alphabetical order 15 © 2011 Pearson Education, Inc. 4. Assign the lowest possible numbers to all of the substituents 16 © 2011 Pearson Education, Inc. 5. If the same substituent numbers are obtained in both directions, the first group cited receives the lower number 6. If a compound has two or more chains of the same length, the parent hydrocarbon is the chain with the greatest number of substituents 17 © 2011 Pearson Education, Inc. 7. Certain common nomenclatures are used in the IUPAC system Some substituents have only a systematic name 18 © 2011 Pearson Education, Inc. Systematic Naming of Substituents Systematic Method •Determine longest chain starting with the point of attachment. •Name longest chain as “alkyl.” •Number and name substituents and add to “alkyl” as prefix. •Name the substituent as (#-alkylalkyl). The parentheses distinguish substituent numbering from the numbering of the longest chain. 19 © 2011 Pearson Education, Inc. Nomenclature of Cycloalkanes 1. No number is needed for a single substituent on a ring 2. Name the two substituents in alphabetical order 20 © 2011 Pearson Education, Inc. 3. If there are more than two substituents, they are cited in alphabetical order 21 © 2011 Pearson Education, Inc. Nomenclature of Alkyl Halides In the IUPAC system, alkyl halides are named as substituted alkanes 22 © 2011 Pearson Education, Inc. Nomenclature of Ethers As substituents: 23 © 2011 Pearson Education, Inc. Nomenclature of Alcohols • In an alcohol, the OH is a functional group • A functional group is the center of reactivity in a molecule 24 © 2011 Pearson Education, Inc. 1. Determine the longest hydrocarbon containing the functional group: 2. The functional group suffix should get the lowest number: 25 © 2011 Pearson Education, Inc. 3. When there is both a functional group suffix and a substituent, the functional group suffix gets the lowest number: 4. The chain is numbered in the direction that gives a substituent the lowest number: 26 © 2011 Pearson Education, Inc. 5. The functional group substituent on a ring gets the number 1, but the functional group is not numbered in the name: CH3 HO CH3 OH CH3 CH3 OH 3-methylcyclohexanol not 3-methylcyclohexan-1-ol 1-methylcyclohexanol not 1-methylcyclohexan-1-ol 2, 2-dimethylcyclopentanol not 2, 2-dimethylcyclopentan-1-ol 6. If there is more than one substituent, the substituents are cited in alphabetical order: 27 © 2011 Pearson Education, Inc. Nomenclature of Amines 28 © 2011 Pearson Education, Inc. The substituents are listed in alphabetical order and a number or an “N” is assigned to each one: 29 © 2011 Pearson Education, Inc. Naming Quaternary Ammonium Salts A disinfectant and Antiseptic 30 © 2011 Pearson Education, Inc. 31 © 2011 Pearson Education, Inc. Common Names Preferred over Systematic Names in Some Cases Pentacyclo[4.2.0.02,5.03,8.04,7]octane “Cubane” Nonacyclo[11.7.1.12,28.0 3,16.04,13.05,10.06,14.07,11.0 15,20] docosane “Bastardane” The unwanted alkane. 32 © 2011 Pearson Education, Inc. Structures of Alkyl Halides 33 © 2011 Pearson Education, Inc. Structures of Alcohol and Ether 34 © 2011 Pearson Education, Inc. Structures of Amines 35 © 2011 Pearson Education, Inc. Attractive Forces van der Waals force Dipole–dipole interaction Hydrogen bonds The greater the attractive forces between molecules, the higher is the boiling point of the compound. 36 © 2011 Pearson Education, Inc. van der Waals Forces The boiling point of a compound increases with the increase in van der Waals force © 2011 Pearson Education, Inc. 37 Dipole–Dipole Interaction Dipole–dipole interactions are stronger than van der Waals force but weaker than ionic or covalent bonds 38 © 2011 Pearson Education, Inc. 39 © 2011 Pearson Education, Inc. Hydrogen bonds are stronger than other dipole-dipole interactions and van der Waals force 40 © 2011 Pearson Education, Inc. 41 © 2011 Pearson Education, Inc. Both van der Waals and dipole-dipole interactions must be overcome for an alkyl halide to boil 42 © 2011 Pearson Education, Inc. The melting point is influenced by the packing of the molecules in the crystal lattice 43 © 2011 Pearson Education, Inc. Like Dissolves Like • Polar compound dissolves in polar solvent • Nonpolar compound dissolves in nonpolar solvent 44 © 2011 Pearson Education, Inc. “Like Dissolves Like” Concept Important in Drug Action • Crossing the Blood-Brain Barrier requires a fat-soluble drug. • THC and Barbiturates possess hydrocarbon tails to facilitate crossing this barrier. • Hydrocarbon substituents are termed “lipophilic” or fat-loving. • Substituents that possess hydrogen-bonding capability are termed “hydrophilic”or water-loving. 45 © 2011 Pearson Education, Inc. Conformations of Alkanes: Rotation about Carbon–Carbon Bonds 46 © 2011 Pearson Education, Inc. Different Conformations of Ethane 47 © 2011 Pearson Education, Inc. A staggered conformer is more stable than an eclipsed conformer 48 © 2011 Pearson Education, Inc. Conformations of n-Butane 49 © 2011 Pearson Education, Inc. Steric strain: repulsion between the electron clouds of atoms or groups The gauche interaction destabilizes the gauche conformation 50 © 2011 Pearson Education, Inc. Cycloalkanes: Ring Strain • Angle strain results when bond angles deviate from the ideal 109.5° bond angle 51 © 2011 Pearson Education, Inc. The chair conformation of cyclohexane is free of strain 52 © 2011 Pearson Education, Inc. Ring Flipping in Cyclohexane 53 © 2011 Pearson Education, Inc. Drawing Cyclohexane 54 © 2011 Pearson Education, Inc. The Conformations of Cyclohexane and Their Energies 55 © 2011 Pearson Education, Inc. Conformations of Monosubstituted Cyclohexanes 56 © 2011 Pearson Education, Inc. 57 © 2011 Pearson Education, Inc. Steric Strain of 1,3-Diaxial Interaction in Methylcyclohexane 58 © 2011 Pearson Education, Inc. The larger the substituent on a cyclohexane ring, the more the equatorial substituted conformer will be favored Keq = [equatorial conformer]/[axial conformer] © 2011 Pearson Education, Inc. 59 The Chair Conformers of cis- or trans1,4-Dimethylcyclohexane 60 © 2011 Pearson Education, Inc. Systematic Method for Drawing Chair Conformations of Cis and Trans Substituted Cyclohexanes 1. Label the chair conformer axial and equatorial bonds with either up (U) or down (D) based on the flat cyclohexane ring. 2. Consider Cis substituents as either UU or DD and Trans substituents as either UD or DU. 3. Example, Draw the more stable conformation of cis-1,3dimethylcyclohexane: 61 © 2011 Pearson Education, Inc. 62 © 2011 Pearson Education, Inc. 63 © 2011 Pearson Education, Inc. 1-tert-Butyl-3-Methylcyclohexane 64 © 2011 Pearson Education, Inc. Conformations and Drug Action Etorphine, a rigid morphine analog: 65 © 2011 Pearson Education, Inc. Conformations and Drug Action • Conformations of the neurotransmitter dopamine • Apomorphine natural products: conformationally-restricted forms of dopamine: •Apomorphine, active dopamine mimic; Isoapomorphine, inactive 66 as dopamine mimic © 2011 Pearson Education, Inc.